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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950797.1_cds_XP_016491094.1_81451
CDS Infomation

[gene=LOC107810781] [db_xref=GeneID:107810781] [protein=cytokinin hydroxylase-like isoform X3] [protein_id=XP_016491094.1] [location=join(118134..118407,118514..118710,118806..119047,119658..120039,120830..121267)] [gbkey=CDS]
Sequence

ATGGCTATGGTGGTATTAGTACTTGTCGTATGTATCTTTATGTCACTGAAAATTGCCTAC
GAAACTCTATCATGTTATTGGCTAACCCCAAGACGTATCAAGAAAATCATGGAAAAACAA
GGAGTGCGTGGTCCGAAACCTCGGTTTCTTGTTGGCAACATCTTAGATATGGCTTCTTTT
GTTTCAAAATCAACCAAAAATGACATGGACTCTATTCACCACGACATCGTTGGTCGCCTT
TTGCCGCATTACGTCGCCTGGTCTAAGATTTATGAGCCGAGAATGTGCTTAACGGAAGCA
GAATTAATCAAAGAGCTTTTCTCCAAATACAGCACTGTTTCTGGGAAATCATGGCTACAA
CAACAAGGTTCCAAACATTTCATCGGCCGTGGTCTTTTGATGGCTAACGGCGATGCTTGG
TACCATCAACGCCACATTGTTGCTCCCGCTTTCATGGGAGACAAACTTAAGAGTTATGCG
GGGTACATGGTGGAATGCACTAAAGGGATGCTCCAATCACTAGGAAATGCAGTTGAATCA
GGTCAGATGGAGTTCGAGATTGGAGAGTACATGACTCGGCTCACTGCAGATATCATATCA
AGAACTGAGTTTGACAGTAGCTACGAGAAAGGAAAACAAATATTCCATTTATTAACACTT
CTGCAGCACCTTTGCGCACAAGCTAGTCGGCACTTGTGCTTTCCTGGTAGCAGGTTTTTG
CCAAGCAAATATAACAGAGATATAAAAGCATTAAAAATGGAAGTGGAGAGGCTACTAATG
GAGATAATACAAAGCAGGAAAGATTGTGTAGAAATAGGAAGAAGCAGCTCATATGGGAAT
GATTTGTTAGGAATGTTATTAAATGAGATGCAAAAGAAAAGAAGCAGCAATGGATTCAGT
TTGAATTTGCAGCTAATTATGGATGAATGCAAGACATTTTTCTTTGCTGGACATGAGACC
ACTGCCCTTTTGTTAACTTGGACTTCTATGTTATTAGCAAGTAATCCCTCTTGGCAAGAT
AAAGTTAGAGATGAGGTCACCCAAGTCTGCAAAAGAGATCCACCCACTGTTGAACATCTT
CCAAAGCTTACTTTGTTCATTTTTTTGCAGTTAAACATGGTAATCAACGAGTCGCTTAGA
CTCTATCCACCAGCTTCTGTACTTCCTAGAATGGCATTTGAGGATTTCAAATTAGGTGAC
CTTCATATTCCAAAGGGTTTATCAATTTGGATTCCAGTACTTGCCATACATCATAGTGAA
GAAATATGGGGAGAAGATGTTAATGAATTCAGGCCTGATCGTTTTGCTTCTAAGTCTTTT
GCTGCCGGCCGGAATTTTCTCCCGTTCGCCGCCGGTCCCCGGAATTGTGTTGGCCAATCT
TTTGCTTTAATGGAAGCCAAGATCATATTAGCCATGTTAATATCCAAATTTCGGTTCACC
ATTTCAGAGAATTATCGCCATGCACCTGTAATTGTCCTCACAATTAAGCCTAAATATGGG
GTTCAAATCAAGTTGACAACTTTGACTCCTTGA

Peptide Sequence

PEP ID

XP_016491094.1
PEP Infomation

PREDICTED: cytokinin hydroxylase-like isoform X3 [Nicotiana tabacum]
Sequence

MAMVVLVLVVCIFMSLKIAYETLSCYWLTPRRIKKIMEKQGVRGPKPRFLVGNILDMASF
VSKSTKNDMDSIHHDIVGRLLPHYVAWSKIYEPRMCLTEAELIKELFSKYSTVSGKSWLQ
QQGSKHFIGRGLLMANGDAWYHQRHIVAPAFMGDKLKSYAGYMVECTKGMLQSLGNAVES
GQMEFEIGEYMTRLTADIISRTEFDSSYEKGKQIFHLLTLLQHLCAQASRHLCFPGSRFL
PSKYNRDIKALKMEVERLLMEIIQSRKDCVEIGRSSSYGNDLLGMLLNEMQKKRSSNGFS
LNLQLIMDECKTFFFAGHETTALLLTWTSMLLASNPSWQDKVRDEVTQVCKRDPPTVEHL
PKLTLFIFLQLNMVINESLRLYPPASVLPRMAFEDFKLGDLHIPKGLSIWIPVLAIHHSE
EIWGEDVNEFRPDRFASKSFAAGRNFLPFAAGPRNCVGQSFALMEAKIILAMLISKFRFT
ISENYRHAPVIVLTIKPKYGVQIKLTTLTP

Transcript Sequence

Gene sequence data has not been registered.